AAGCCCC
Repeat=14, 31.82%
-6.481, GO:0009059|macromolecule biosynthesis
-6.282, GO:0044267|cellular protein metabolism
-6.260, GO:0044260|cellular macromolecule metabolism
-5.994, GO:0019538|protein metabolism
| Size | 7 |
|---|---|
| Pattern | AAGCCCC |
| Pattern_RC | GGGGCTT |
| LogP | -6.16318929670747 |
| Similarity | 0.536664446261082 |
| Hits in Cluster | 44 |
| Hits in Genome | 198 |
| PSSM | AAGCCCC Repeat=14, 31.82% |
| Instances | AAGCCCC AAGCCCT AAGCCCG AAGCCAC AAGCCCA AAGGCCC AAGCCTC AGGCCCC ATGCCCC GGGGCTA AAGCGCC |
| In Cluster Annotation | -6.828, GO:0006412|protein biosynthesis -6.481, GO:0009059|macromolecule biosynthesis -6.282, GO:0044267|cellular protein metabolism -6.260, GO:0044260|cellular macromolecule metabolism -5.994, GO:0019538|protein metabolism |
 |
| Species | LogP | InCluster | InGenome | InClusterSite | InGenomeSite | Similarity |
|---|---|---|---|---|---|---|
| Py | -3.02 | 49 | 242 | 59 | 276 | 0.54 |
| Pc | -1.34 | 104 | 689 | 240 | 1497 | 0.42 |
Code: Y=CT W=AT S=CG M=AC K=GT R=AG H=ACT B=CGT V=ACG D=AGT N=ACGT Consensus WNWNNWWWNWWNWWWWWWNNAAGCCCNNWWWWNWWWNNNAWWNNWTW MAL13P1.58 + -541 ttataaatttgttgaacaaaAAGCCCTatattatgtttcgatatgtt -495 [-518.0] hypothetical protein MAL6P1.93 + -246 tatttatgtaggtttttattTAGCCCCataaaattattttcattttt -200 [-223.0] hypothetical protein MAL7P1.77 + -603 atatataatatttattattaAAGCCTCttatgtaaaaaacacatttt -557 [-580.0] hypothetical protein MAL8P1.125 + -330 taataaattaaaattaaaggAAGCCACctcaaaaaaaaaaaaaaaaa -284 [-307.0] tyrosyl-tRNA synthetase, putative PF07_0062 - -371 ttttggtcatattataattAAGGCCCttctatttaaaataatggtta -417 [-394.0] GTP-binding translation elongation factor tu family protein, putative PF07_0070 + -45 agaaaaaataaatgtgttaaAGGCCCCaccaccttacgtgtaaca -1 [-24.0] transporter/permease protein, putative PF08_0116 - -888 ataggaataaaggtaagtacAAGCCACaattatttgtagacaatatt -934 [-911.0] hypothetical protein PF08_0135 + -971 tacaaagcactggtttttctATGCCCCcaaataaaaaaaaaatatat -925 [-948.0] hypothetical protein, conserved PF10_0149 + -818 agttctttctaaaaatagtgAAGCCACaaaaagtgggggaatgtttt -772 [-795.0] cysteine -- tRNA ligase, putative PF10_0150 - -826 agttctttctaaaaatagtgAAGCCACaaaaagtgggggaatgtttt -872 [-849.0] methionine aminopeptidase, putative PF10_0300 - -902 tatattttaggcatagaaggAAGCGCCaataaattaggcataagtat -948 [-925.0] hypothetical protein, conserved PF10_0310 + -423 tgtgatgtacatatttatatAGGCCCCaaataattatttatttattt -377 [-400.0] hypothetical protein PF11_0099 - -139 acaaatatctcttattctgtAAGCCCTtaaaatattatgaccaaaat -185 [-162.0] heat shock protein DnaJ homologue Pfj2 PF11_0245 + -507 attaattaaatatcacaagaAAGCCCTtttttttattatatattttt -461 [-484.0] translation elongation factor EF-1, subunit alpha, putative PF11_0316 - -741 cattttgcaatgatttagtAAGGCCCtcatatgaatgttggtatttt -787 [-764.0] hypothetical protein PF11_0363 - -279 ttatatgtgaaaaaataaatAAGCCTCaatttaatatattttataaa -325 [-302.0] hypothetical protein PF11_0418 - -338 tttattttactttaaaatatAAGCCACtacacacatatataaatgta -384 [-361.0] hypothetical protein PF11_0438 + -85 aaatatcatttttttttatcTAGCCCCttattaccttttaaaagaaa -39 [-62.0] Ribosomal protein, putative PF13_0214 + -365 aaacaaattgtatatctttcAAGCCCAagttttaaagatattggatt -319 [-342.0] elongation factor 1-gamma, putative PF13_0348 + -674 aaaaaaaaaaaaaaaaaaaaAAGCCCAaatgtttttgtaatatagat -628 [-651.0] hypothetical protein PF14_0261 + -630 cgatatttattaccaattgtAAGCCCAaaatattaatgttaaaaaat -584 [-607.0] proliferation-associated protein 2g4, putative PF14_0393 - -962 atattattatatatatgttgAAGCCCTagtgaaataata -1000 [-977.0] structure specific recognition protein, putative PF14_0499 + -830 ttatatggctttctttttatAAGCCCGatggaaaataagtaaggata -784 [-807.0] hypothetical protein PF14_0673 - -707 tatcaataaaatggtgaaatAAGCCCAcatatatatatatatatata -753 [-730.0] hypothetical protein PF14_0700 + -912 aaatatatttcacaatatacAAGCCCTcttatttttcccaatttctt -866 [-889.0] hypothetical protein, conserved PFB0745w - -829 tgttggtataaatatactaaAAGCCTCttatataattcaagatcttt -875 [-852.0] hypothetical protein PFC0105w + -370 tatgttatattaattttaatAAGCCCAttgattgtaacatacatata -324 [-347.0] serine/threonine protein kinase, putative PFC0135c - -9 taaaaaaatataactatattAAGCCACgatttggctatatatacata -55 [-32.0] conserved protein PFC0285c - -74 tatacattcatgttgtataaAAGCCCGtattcttatgacattataaa -120 [-97.0] T-complex protein beta subunit, putative PFC0295c + -488 aattattataattttattaaAAGCCCTtaataaaattattatatata -442 [-465.0] 40S ribosomal protein S12, putative PFC0775w + -551 taaataatatatataaataaAAGCCCCctattattagaaatatttat -505 [-528.0] 40S ribosomal protein S11, putative PFD0540c + -257 ccttcttatttgttttaaaaAAGCCACatacacatttccattggtac -211 [-234.0] hypothetical protein PFD0600c - -187 aataaataaatatataaaatAAGCCCAttatggctagataaaaacat -233 [-210.0] ribosomal protein, putative PFD0670c - -780 aaaggcttaaaataaataaaATGCCCCattataaattcctatttgta -826 [-803.0] hypothetical protein PFE0185c + -405 tatatacattatattaatgAAGGCCCagttccaaaataaaaaaaaaa -359 [-382.0] 60S ribosomal subunit protein L31, putative PFE1005w + -964 tagaatattttatataatatATGCCCCttaaaaaataggtggcaata -918 [-941.0] 40S ribosomal subunit protein S9, putative PFI0630w + -209 tttatttttcttttattttaATGCCCCatgaatatatacatatattt -163 [-186.0] 26S proteasome regulatory subunit, putative PFL0310c + -892 atttataagaaaataaaaaaAAGCCCGaacataataatattataata -846 [-869.0] eukaryotic translation initiation factor 3 subunit 8, putative PFL0620c - -869 tatatatatatatatatattAAGCCCTggtacttacataaatatata -915 [-892.0] choline transporter PFL0625c + -942 tatgtaaaattataaatatAAGGCCCaaaaaaaaaaaaaaaaaaaaa -896 [-919.0] eukaryotic translation initiation factor 3 subunit 10, putative PFL1740w + -32 gacggaaacccttttttggtAAGCCCTcgaaa -1 [-24.0] hypothetical protein PFL1845c + -414 atttgttagtgggaaaaataAAGCCCTacatagttttttttttcttt -368 [-391.0] calcyclin binding protein, putative PFL1920c + -1000 cAAGCCACttaatatattttaaaattaa -973 [-977.0] hydroxyethylthiazole kinase, putative PFL2275c + -976 atatgaaactaaattttttaAAGCCACtatgataattttaaagatca -930 [-953.0] 70 kDa peptidylprolyl isomerase, putative