Size8
PatternAATGGACA
Pattern_RCTGTCCATT
LogP-8.52775088353479
Similarity0.604578810349661
Hits in Cluster19
Hits in Genome356
PSSM
AATGGACA
Repeat=4, 21.05%
InstancesAATGGACA AATAGACA ACTGGACA AATGGAGA TATGGACA AATCGACA AATGGACC
In Cluster Annotation-2.174, GO:0000104|succinate dehydrogenase activity
-2.174, GO:0009055|electron carrier activity
-1.576, GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors
-1.403, GO:0020007|apical complex
-1.403, GO:0045177|apical part of cell

SpeciesLogPInClusterInGenomeInClusterSiteInGenomeSiteSimilarity
Py-2.56169002414360.55
Pb-1.21107281614290.49
Pc-3.415686780.65

Pf in ClusterPf in GenomePy in ClusterPy in GenomePb in ClusterPb in GenomePc in ClusterPc in Genome

Code: Y=CT W=AT S=CG M=AC K=GT R=AG H=ACT B=CGT V=ACG D=AGT N=ACGT
Consensus              WNTANNANANWWWWWTWWAAAATGGACAHAWNTAWAWATNWNANNANW
MAL13P1.125       +   -570 tgtacaaaacaatgttgtaaAATGGACAtaaaaaaaaaaaaaaaaata   -523   [-546.5]  hypothetical protein
MAL13P1.212       +   -117 tccaagaagataaaaaaaagAATGGACAactctattttgtaaacaaat    -70    [-93.5]  hypothetical protein
PF08_0005         -   -386 aatataacaatattgatgcaACTGGACAtatatatatatatatatata   -433   [-409.5]  hypothetical protein
PF08_0088         +   -483 tttttctaagttgaatattaAATAGACAaaaatagttgtttgatttga   -436   [-459.5]  hypothetical protein
PF11_0328         +   -379 gcctcgtaaatttatttttaAATGGACCcttgattatatatgtctaca   -332   [-355.5]  hypothetical protein
PF11_0486         +   -893 aaaaaaaaggaaaaaaaaaaAATAGACAataataaaaatctgcatgtg   -846   [-869.5]  MAEBL, putative
PF14_0073         +   -225 tattgtcttttacatatattAATAGACAtatgttattttttctaaaat   -178   [-201.5]  hypothetical protein
PF14_0074         -   -508 atttttaaaactgattcaaaAATGGAGAcaagaaattattatataagc   -555   [-531.5]  hypothetical protein
PF14_0427         -   -497 aatataattttttttttttgTATGGACAcatttttttatgtcaaaaat   -544   [-520.5]  hypothetical protein
PF14_0447         -   -190 aatagaacataaatatatatAATGGACAaacttaaaaataacaacgaa   -237   [-213.5]  hypothetical protein
PF14_0729         +   -896 ataaaattttatttatataaACTGGACAcaagataaaaaaaaaagaaa   -849   [-872.5]  hypothetical protein
PFA0380w          -   -457 ggccattgtatatttgttggAATGGAGAacaaggcaacttagataaaa   -504   [-480.5]  serine/threonine protein kinase, putative
PFD0430c          -   -509 attaatacaaaaaaataaaaAATAGACAaaaatataattatatgtgca   -556   [-532.5]  hypothetical protein
PFE0360c          -   -900 aatacaagatgttatttaaaAATGGAGAtaagcatactcttacaatga   -947   [-923.5]  hypothetical protein
PFE0565w          -   -523 gaaaaaataattaatatatcAATCGACAattatttgaaagtcacattt   -570   [-546.5]  hypothetical protein
PFI0945w          +   -666 aatttttaagtcttgtaaaaAATGGAGAttgtacaacatgaactgttc   -619   [-642.5]  hypothetical protein
PFL0065w          +   -788 atatacatatatatatttatTATGGACAtaatttatatttgtatgaaa   -741   [-764.5]  hypothetical protein
PFL0370w          -   -409 tgttaaataaatttttattcAATAGACAtaacaaaacaaatatataat   -456   [-432.5]  hypothetical protein
PFL0630w          +   -656 tatacataaatttattacaaTATGGACAcatttaaaatatatattttt   -609   [-632.5]  iron-sulfur subunit of succinate dehydrogenase